STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NXF1Nuclear RNA export factor 1 isoform 1. (619 aa)    
Predicted Functional Partners:
NXT1
Nuclear transport factor 2 like export factor 1.
    
 0.998
RAE1
Ribonucleic acid export 1.
    
 0.994
NXT2
Nuclear transport factor 2 like export factor 2.
    
 0.990
THOC5
THO complex subunit 5 homolog.
    
 0.986
UPF3A
Regulator of nonsense transcripts 3A isoform hUpf3p.
    
 0.973
ENSCJAP00000070523
Smg4_UPF3 domain-containing protein.
    
 0.973
ALYREF
Aly/REF export factor.
    
 0.969
EIF4A3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 0.968
NUP42
Nucleoporin-like protein 2.
    
 0.947
NUP214
Nucleoporin 214.
   
 0.937
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.