STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM19Putative RNA-binding protein 19. (960 aa)    
Predicted Functional Partners:
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
   0.985
SURF6
Surfeit 6.
   
 
 0.957
PWP2
Uncharacterized protein.
   
 
 0.948
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family.
   
  
 0.945
H9KXP1_CALJA
Bms1-type G domain-containing protein.
   
 
 0.942
ENSCJAP00000071974
Uncharacterized protein.
   
 
 0.942
ENSCJAP00000072065
DUF663 domain-containing protein.
   
 
 0.942
WDR12
Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  
 0.928
BYSL
Bystin like.
   
 
 0.927
WDR36
WD repeat-containing protein 36.
   
 
 0.923
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.