STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IPO8Importin-8 isoform 1. (1037 aa)    
Predicted Functional Partners:
KPNB1
Karyopherin subunit beta 1.
   
 
 0.886
TTC37
Tetratricopeptide repeat domain 37.
   
 0.856
EXOSC10
Exosome component 10.
   
 0.855
RANBP2
RAN binding protein 2.
   
 0.842
EXOSC9
Exosome complex component RRP45 isoform 2.
   
 0.835
EXOSC2
Exosome component 2.
   
 0.833
EXOSC1
Exosome complex component CSL4.
   
 0.819
EXOSC7
Exosome complex component RRP42.
   
 0.818
RAN
GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.817
EXOSC8
Exosome component 8.
   
 0.812
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.