STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F7IMW2_CALJAUncharacterized protein. (382 aa)    
Predicted Functional Partners:
ARHGEF18
Uncharacterized protein.
 
      0.899
RHOA
Transforming protein RhoA.
   
 0.672
RHOC
Uncharacterized protein.
   
 0.672
ENSCJAP00000068434
Uncharacterized protein.
   
 0.672
ENSCJAP00000071515
Uncharacterized protein.
   
 0.672
CDC42BPB
CDC42 binding protein kinase beta; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
   
 0.540
CGN
Cingulin; Probably plays a role in the formation and regulation of the tight junction (TJ) paracellular permeability barrier; Belongs to the cingulin family.
     
 0.539
RND3
Rho-related GTP-binding protein RhoE.
   
 0.518
RND1
Rho-related GTP-binding protein Rho6.
   
 0.518
ITSN2
Intersectin 2.
   
 0.508
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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