STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGK1Phosphoglycerate kinase. (417 aa)    
Predicted Functional Partners:
TPI1
Triosephosphate isomerase.
 
 0.993
F7EMI9_CALJA
Glyceraldehyde-3-phosphate dehydrogenase.
 
 0.983
GAPDHS
Glyceraldehyde-3-phosphate dehydrogenase.
 
 0.983
PGAM1
Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
   
 0.981
PGAM2
Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
   
 0.977
BPGM
Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
   
 0.977
PGK2
Phosphoglycerate kinase.
  
 
0.934
GPI
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.887
CSTF3
Cleavage stimulation factor subunit 3 isoform 1.
  
 
 0.872
F7H580_CALJA
Glyceraldehyde-3-phosphate dehydrogenase.
 
 0.842
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.