MPP2 protein (Callithrix jacchus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MPP2

Membrane palmitoylated protein 2; Belongs to the MAGUK family. (635 aa)

Predicted Functional Partners:

LIN7A

0.775

LIN7B

0.743

LIN7C

0.743

CAMK2A

0.743

APBA1

0.690

APBA3

0.690

APBA2

0.690

ENSCJAP00000073928

0.690

CAMK2D

0.688

CAMK2G

0.629

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APBA1	CAMK2A	ENSCJAP00000002972	ENSCJAP00000062209	Amyloid beta precursor protein binding family A member 1.	Calcium/calmodulin dependent protein kinase II alpha.	0.650
APBA1	CAMK2D	ENSCJAP00000002972	ENSCJAP00000071439	Amyloid beta precursor protein binding family A member 1.	Protein kinase domain-containing protein.	0.650
APBA1	LIN7A	ENSCJAP00000002972	ENSCJAP00000035912	Amyloid beta precursor protein binding family A member 1.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.840
APBA1	LIN7B	ENSCJAP00000002972	ENSCJAP00000000312	Amyloid beta precursor protein binding family A member 1.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.727
APBA1	LIN7C	ENSCJAP00000002972	ENSCJAP00000057896	Amyloid beta precursor protein binding family A member 1.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.809
APBA1	MPP2	ENSCJAP00000002972	ENSCJAP00000078853	Amyloid beta precursor protein binding family A member 1.	Membrane palmitoylated protein 2; Belongs to the MAGUK family.	0.690
APBA2	CAMK2A	ENSCJAP00000070370	ENSCJAP00000062209	Amyloid beta precursor protein binding family A member 2.	Calcium/calmodulin dependent protein kinase II alpha.	0.650
APBA2	CAMK2D	ENSCJAP00000070370	ENSCJAP00000071439	Amyloid beta precursor protein binding family A member 2.	Protein kinase domain-containing protein.	0.650
APBA2	LIN7A	ENSCJAP00000070370	ENSCJAP00000035912	Amyloid beta precursor protein binding family A member 2.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.551
APBA2	LIN7B	ENSCJAP00000070370	ENSCJAP00000000312	Amyloid beta precursor protein binding family A member 2.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.551
APBA2	LIN7C	ENSCJAP00000070370	ENSCJAP00000057896	Amyloid beta precursor protein binding family A member 2.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.551
APBA2	MPP2	ENSCJAP00000070370	ENSCJAP00000078853	Amyloid beta precursor protein binding family A member 2.	Membrane palmitoylated protein 2; Belongs to the MAGUK family.	0.690
APBA3	CAMK2A	ENSCJAP00000027605	ENSCJAP00000062209	Amyloid beta A4 protein-binding family A member 3.	Calcium/calmodulin dependent protein kinase II alpha.	0.650
APBA3	CAMK2D	ENSCJAP00000027605	ENSCJAP00000071439	Amyloid beta A4 protein-binding family A member 3.	Protein kinase domain-containing protein.	0.650
APBA3	LIN7A	ENSCJAP00000027605	ENSCJAP00000035912	Amyloid beta A4 protein-binding family A member 3.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.551
APBA3	LIN7B	ENSCJAP00000027605	ENSCJAP00000000312	Amyloid beta A4 protein-binding family A member 3.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.551
APBA3	LIN7C	ENSCJAP00000027605	ENSCJAP00000057896	Amyloid beta A4 protein-binding family A member 3.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.551
APBA3	MPP2	ENSCJAP00000027605	ENSCJAP00000078853	Amyloid beta A4 protein-binding family A member 3.	Membrane palmitoylated protein 2; Belongs to the MAGUK family.	0.690
CAMK2A	APBA1	ENSCJAP00000062209	ENSCJAP00000002972	Calcium/calmodulin dependent protein kinase II alpha.	Amyloid beta precursor protein binding family A member 1.	0.650
CAMK2A	APBA2	ENSCJAP00000062209	ENSCJAP00000070370	Calcium/calmodulin dependent protein kinase II alpha.	Amyloid beta precursor protein binding family A member 2.	0.650