STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH2D5SH2 domain-containing protein 5 isoform 1. (427 aa)    
Predicted Functional Partners:
BCR
BCR activator of RhoGEF and GTPase.
    
 
 0.558
CTXN1
Cortexin 1.
      
 0.515
FRRS1L
Ferric chelate reductase 1 like.
      
 0.515
SPOCD1
SPOC domain containing 1.
      
 0.476
EVI2A
Uncharacterized protein.
      
 0.475
RGS19
Regulator of G-protein signaling 19.
      
 0.467
ARHGAP22
Rho GTPase activating protein 22.
      
 0.463
RNF144B
RBR-type E3 ubiquitin transferase.
      
 0.404
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.