STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCC2GRIP and coiled-coil domain containing 2. (1686 aa)    
Predicted Functional Partners:
STX10
Syntaxin 10; Belongs to the syntaxin family.
   
 
 0.956
RAB9A
Ras-related protein Rab-9A.
     
 0.949
RAB9B
RAB9B, member RAS oncogene family.
     
 0.946
NUP93
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.
   
 0.926
NUP155
Nuclear pore complex protein Nup155 isoform 1.
   
 0.916
NUP54
Nucleoporin p54.
   
 0.900
NUP214
Nucleoporin 214.
   
 0.887
NUP85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.884
RAB6B
Uncharacterized protein.
    
 0.879
RAB6A
Ras-related protein Rab-6A isoform b.
    
 0.879
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.