STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYF5Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. (255 aa)    
Predicted Functional Partners:
PAX3
Uncharacterized protein.
   
 
 0.877
PAX7
Paired box 7.
   
 
 0.850
MSTN
Myostatin.
   
  
 0.839
TCF3
Transcription factor 3.
   
 0.802
TCF12
Transcription factor 12 isoform a.
   
 0.754
TCF4
Transcription factor 4.
   
 0.744
MYF6
Myogenic factor 6.
  
 
0.694
MEF2C
Myocyte-specific enhancer factor 2C isoform 3.
    
 0.686
ENSCJAP00000061225
Myocyte enhancer factor 2A.
    
 0.671
EP300
E1A binding protein p300.
    
 
 0.659
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.