STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRIFINGalectin. (144 aa)    
Predicted Functional Partners:
WDR49
WD repeat domain 49.
     
 0.782
PLEKHH3
Pleckstrin homology, MyTH4 and FERM domain containing H3.
      
 0.777
TTC30A
Uncharacterized protein.
      
 0.777
FRMD7
FERM domain containing 7.
      
 0.775
ASB15
Ankyrin repeat and SOCS box protein 15.
      
 0.770
NUAK2
NUAK family kinase 2.
      
 0.770
LMOD2
WH2 domain-containing protein.
      
 0.725
CRYBA4
Crystallin beta A4; Belongs to the beta/gamma-crystallin family.
      
 0.589
PLEKHG3
Pleckstrin homology and RhoGEF domain containing G3.
      
 0.589
RNF10
Ring finger protein 10.
      
 0.576
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.