STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCAS1Breast carcinoma-amplified sequence 1. (584 aa)    
Predicted Functional Partners:
FANCM
FA complementation group M.
    
 0.797
TPD52
Tumor protein D52.
      
 0.620
MYH1
Myosin heavy chain 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.614
RORB
RAR related orphan receptor B.
   
  
 0.597
QKI
QKI, KH domain containing RNA binding.
   
 
 0.597
IPCEF1
Interaction protein for cytohesin exchange factors 1.
    
 
 0.573
TFF3
P-type domain-containing protein.
      
 0.567
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 0.513
ERBB4
Receptor protein-tyrosine kinase.
   
 0.502
ZNF217
Zinc finger protein 217.
    
 
 0.483
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.