STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCF19Transcription factor 19. (348 aa)    
Predicted Functional Partners:
INTS10
Integrator complex subunit 10.
      
 0.896
RNF39
Ring finger protein 39.
      
 0.831
CCHCR1
Coiled-coil alpha-helical rod protein 1.
      
 0.814
UBE2L3-2
Ubiquitin-conjugating enzyme E2 L3 isoform 1; Belongs to the ubiquitin-conjugating enzyme family.
   
  
 0.813
UBE2L3
Ubiquitin conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family.
   
  
 0.813
ID1
DNA-binding protein inhibitor ID-1 isoform a.
      
 0.760
CDSN
Corneodesmosin.
      
 0.746
POU5F1-2
Uncharacterized protein.
      
 0.716
POU5F1
POU-specific domain-containing protein.
      
 0.716
ETF1
Eukaryotic peptide chain release factor subunit 1.
      
 0.701
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.