STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA5Spermatogenesis associated 5. (811 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
   
 0.999
DERL1
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
   
 0.932
UFD1
Uncharacterized protein.
    
 0.932
YOD1
YOD1 deubiquitinase.
   
 0.922
UBXN1
UBX domain protein 1.
   
 0.910
FAAP100
Fanconi anemia-associated protein of 100 kDa isoform b.
   
 0.865
NPLOC4
Nuclear protein localization protein 4 homolog.
   
 0.865
PSMB2
Proteasome subunit beta.
   
 0.865
UBXN2B
UBX domain protein 2B.
   
 0.862
NSFL1C
NSFL1 cofactor p47 isoform d.
   
 0.862
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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