STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCG1ATP-binding cassette sub-family G member 1 isoform 4. (678 aa)    
Predicted Functional Partners:
ABCG5
ATP binding cassette subfamily G member 5.
   
0.885
APOE
Apolipoprotein E.
      
 0.883
APOA1
Apolipoprotein A1.
   
 0.873
ATP8B1
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
   
 0.787
CETP
Cholesteryl ester transfer protein.
   
  
 0.725
CROT
Peroxisomal carnitine O-octanoyltransferase isoform 2; Belongs to the carnitine/choline acetyltransferase family.
   
  
 0.703
SREBF2
Sterol regulatory element binding transcription factor 2.
    
 
 0.703
PLTP
Phospholipid transfer protein.
      
 0.696
NPC1
NPC intracellular cholesterol transporter 1.
   
 
 0.688
SCARB1
Scavenger receptor class B member 1; Belongs to the CD36 family.
   
  
 0.678
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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