STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMBIM1Protein lifeguard 3; Belongs to the BI1 family. (311 aa)    
Predicted Functional Partners:
MAP3K5
Mitogen-activated protein kinase kinase kinase 5.
      
 0.638
TMBIM6
Uncharacterized protein; Belongs to the BI1 family.
   
  
 0.602
NEDD4L
NEDD4 like E3 ubiquitin protein ligase.
    
 
 0.492
TLR4
Toll like receptor 4; Belongs to the Toll-like receptor family.
   
  
 0.467
APOOL
MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
      
 0.452
ENSCJAP00000067885
MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
      
 0.452
CFLAR
CASP8 and FADD-like apoptosis regulator isoform 1; Belongs to the peptidase C14A family.
      
 0.442
RUFY4
RUN and FYVE domain containing 4.
   
  
 0.403
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.