STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POMKProtein kinase-like protein SgK196. (350 aa)    
Predicted Functional Partners:
B3GALNT2
Beta-1,3-N-acetylgalactosaminyltransferase 2.
     
 0.992
FKTN
Fukutin isoform a.
     
 0.962
POMGNT2
Protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-).
      
 0.921
RXYLT1
Transmembrane protein 5.
      
 0.862
FKRP
Fukutin-related protein.
      
 0.820
POMT1
Protein O-mannosyltransferase 1.
    
 
 0.817
OR52E4
Olfactory receptor.
      
 0.780
FNTA
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha.
      
 0.778
HGSNAT
Heparan-alpha-glucosaminide N-acetyltransferase.
      
 0.778
DAG1
Dystroglycan preproprotein.
     
 0.777
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.