STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEFB116Defensin beta 116. (101 aa)    
Predicted Functional Partners:
DEFB126
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
     
 0.593
DEFB123
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
     
 0.589
DEFB124
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
     
 0.567
DEFB125
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
     
 0.549
DEFB128
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
     
 0.540
DEFB110
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
     
 0.536
DEFB113
Defensin beta 113.
     
 0.531
DEFB129
Defensin beta 129.
     
 0.530
DEFB119
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
     
 0.529
DEFB118
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
     
 0.470
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.