STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHLDA1Pleckstrin homology like domain family A member 1. (580 aa)    
Predicted Functional Partners:
AURKA
Aurora kinase A; Belongs to the protein kinase superfamily.
     
 0.569
IER3
Radiation-inducible immediate-early gene IEX-1.
   
  
 0.558
COTL1
ADF-H domain-containing protein.
      
 0.524
ARHGAP45
Rho GTPase activating protein 45.
      
 0.504
FLVCR2
Feline leukemia virus subgroup C receptor-related protein 2 isoform 1.
      
 0.501
CHST15
Carbohydrate sulfotransferase 15 isoform 1.
      
 0.499
IER2
Immediate early response gene 2 protein.
      
 0.499
SH2B3
SH2B adaptor protein 3.
      
 0.467
UPK1B
Tetraspanin.
    
 
 0.463
TMEM200A
Transmembrane protein 200A.
      
 0.461
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.