STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCJAP00000052922Uncharacterized protein. (89 aa)    
Predicted Functional Partners:
EMD
Emerin (Predicted).
    
 0.890
LMNA
Uncharacterized protein; Belongs to the intermediate filament family.
   
 0.820
LMNB1
Lamin-B1 isoform 1; Belongs to the intermediate filament family.
   
 0.733
LMNTD1
Lamin tail domain containing 1.
   
 0.658
LEMD3
Inner nuclear membrane protein Man1 isoform 1.
   
 0.656
RBM39
RNA binding motif protein 39.
   
 0.594
ANKLE2
Ankyrin repeat and LEM domain-containing protein 2.
    
 0.571
ENSCJAP00000075603
Uncharacterized protein.
    
 0.571
VRK2
Serine/threonine-protein kinase VRK2 isoform 1.
    
 0.547
RBM23
RNA binding motif protein 23.
   
 0.543
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.