STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCTD3Potassium channel tetramerization domain containing 3. (815 aa)    
Predicted Functional Partners:
KCTD19
Potassium channel tetramerization domain containing 19.
    
 
 0.668
KCTD11
Potassium channel tetramerization domain containing 11.
    
 
0.600
ENSCJAP00000056624
G-patch domain containing 2.
      
 0.585
FBXW8
F-box/WD repeat-containing protein 8 isoform 1.
      
 0.541
ST6GALNAC5
Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5; Belongs to the glycosyltransferase 29 family.
      
 0.532
LDB2
LIM domain-binding protein 2 isoform a.
      
 0.513
SHKBP1
SH3KBP1-binding protein 1.
  
 
  
0.505
RRP15
Uncharacterized protein.
      
 0.463
ENSCJAP00000068910
Uncharacterized protein.
      
 0.463
LRRC40
Leucine-rich repeat-containing protein 40.
    
   0.461
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.