STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRM6Glutamate metabotropic receptor 6. (903 aa)    
Predicted Functional Partners:
NYX
Nyctalopin.
     
 0.855
TRPM1
Transient receptor potential cation channel subfamily M member 1.
      
 0.750
GNA13
G protein subunit alpha 13.
   
  0.715
GNA12
Guanine nucleotide-binding protein subunit alpha-12.
   
  0.715
AGT
Angiotensin 1-4; Essential component of the renin-angiotensin system (RAS), a potent regulator of blood pressure, body fluid and electrolyte homeostasis. [Angiotensin-3]: stimulates aldosterone release. Belongs to the serpin family.
   
 
  0.694
F2
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
    
 0.679
GNAS
GNAS complex locus.
     
 0.656
LOC103787209
Protein NESP55 isoform NESP55.
   
 
  0.652
CXCL8
Multifunctional fusion protein; Belongs to the intercrine alpha (chemokine CxC) family.
     
  0.650
GRIA4
Glutamate ionotropic receptor AMPA type subunit 4.
   
  
 0.643
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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