STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIN1Peptidyl-prolyl cis-trans isomerase. (163 aa)    
Predicted Functional Partners:
IRF3
Interferon regulatory factor 3 isoform 1.
   
 0.968
POLR2A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.830
PML
Promyelocytic leukemia.
    
 
 0.665
SFN
Stratifin; Belongs to the 14-3-3 family.
    
 
 0.664
HIPK2
Homeodomain-interacting protein kinase 2 isoform 1.
    
 0.647
HCFC1
Host cell factor C1.
      
 0.562
HCFC2
Host cell factor C2.
      
 0.562
RANBP2
RAN binding protein 2.
   
 0.546
FKBP1B
Peptidylprolyl isomerase.
   
 
 0.534
CLPP
ATP-dependent Clp protease proteolytic subunit.
  
 
 0.490
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.