STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMD5Sterile alpha motif domain containing 5. (175 aa)    
Predicted Functional Partners:
SASH1
SAM and SH3 domain-containing protein 1.
 
    
 0.908
EPHA4
Ephrin type-A receptor 4.
   
0.581
EPHA5
Ephrin type-A receptor 5 isoform a.
   
0.581
ADGB
Androglobin; Belongs to the peptidase C2 family.
      
 0.573
SAMD14
SAM domain-containing protein.
      
 0.559
SAMD10
Sterile alpha motif domain-containing protein 10.
      
 0.519
CALY
Calcyon neuron specific vesicular protein.
      
 0.463
SHC4
SHC adaptor protein 4.
    
 0.416
SHC1
SHC-transforming protein 1 isoform 3.
    
 0.416
SHC3
SHC adaptor protein 3.
    
 0.416
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.