STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PALMParalemmin. (394 aa)    
Predicted Functional Partners:
F10
Coagulation factor X.
      
 0.712
YKT6
Synaptobrevin homolog YKT6; Belongs to the synaptobrevin family.
      
 0.617
PPP1R9B
Protein phosphatase 1 regulatory subunit 9B.
      
 0.521
CDK3
Cyclin dependent kinase 3; Belongs to the protein kinase superfamily.
      
 0.501
AMPH
Amphiphysin isoform 1.
      
 0.442
MARCKS
Myristoylated alanine-rich C-kinase substrate.
      
 0.424
BBS1
BBS1 domain-containing protein.
      
 0.420
LOC100391685
Choriogonadotropin subunit beta; Stimulates the ovaries to synthesize the steroids that are essential for the maintenance of pregnancy; Belongs to the glycoprotein hormones subunit beta family.
      
 0.404
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.