STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARNT2Aryl hydrocarbon receptor nuclear translocator 2. (769 aa)    
Predicted Functional Partners:
HIF1A
Hypoxia inducible factor 1 subunit alpha.
   
0.995
EPAS1
Endothelial PAS domain protein 1.
   
0.993
NPAS4
Neuronal PAS domain protein 4.
    
0.948
ARNT
Aryl hydrocarbon receptor nuclear translocator isoform 1.
  
  
0.940
HIF3A
Hypoxia inducible factor 3 subunit alpha.
   
0.933
SIM1
SIM bHLH transcription factor 1.
    
 
0.880
AHR
Uncharacterized protein.
   
0.875
ENSCJAP00000069506
Uncharacterized protein.
   
0.875
ENSCJAP00000077114
BHLH domain-containing protein.
   
 0.864
NPAS3
Neuronal PAS domain protein 3.
    
0.834
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.