STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCJAP00000053723Uncharacterized protein. (493 aa)    
Predicted Functional Partners:
LOC100387926
Uncharacterized protein.
   
 0.793
CD47
CD47 molecule.
   
 0.729
CD79A
CD79a molecule.
   
 0.712
FCGR2A
Uncharacterized protein.
   
 0.698
CD79B
CD79b molecule.
   
 0.691
C1QC
Complement C1q subcomponent subunit C.
   
  0.666
ENSCJAP00000074090
Ig-like domain-containing protein.
  
 0.666
VEGFA
Vascular endothelial growth factor A; Belongs to the PDGF/VEGF growth factor family.
    
 
 0.655
TRAV19
T cell receptor alpha variable 19.
  
 0.631
CXCL8
Multifunctional fusion protein; Belongs to the intercrine alpha (chemokine CxC) family.
   
   0.626
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.