STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELAVL4ELAV-like protein; Belongs to the RRM elav family. (385 aa)    
Predicted Functional Partners:
HIVEP3
Human immunodeficiency virus type I enhancer binding protein 3.
      
 0.796
MAST2
Microtubule-associated serine/threonine-protein kinase 2.
   
  
 0.704
EPS15
Epidermal growth factor receptor substrate 15 isoform A.
   
  
 0.676
ZNF337
Zinc finger protein 337.
      
 0.613
TCTE1
T-complex-associated-testis-expressed 1.
      
 0.613
XPO1
Exportin-1.
   
 
 0.595
ENSCJAP00000069599
RRM domain-containing protein.
  
 0.583
DHX36
DEAH-box helicase 36.
   
 0.578
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
    
 
 0.568
CCDC65
Coiled-coil domain containing 65.
      
 0.564
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.