STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVB12AMultivesicular body subunit 12A. (273 aa)    
Predicted Functional Partners:
VPS28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.995
VPS37B
Vacuolar protein sorting-associated protein 37B.
   
 0.993
TSG101
Uncharacterized protein.
    
 0.985
MVB12B
Multivesicular body subunit 12B isoform 1.
    
0.949
VPS37C
Vacuolar protein sorting-associated protein 37C.
   
 0.944
VPS37A
Vacuolar protein sorting-associated protein 37A isoform 1.
   
 0.937
PDCD6IP
Programmed cell death 6-interacting protein isoform 2.
     
 0.932
VPS37D
Vacuolar protein sorting-associated protein 37D.
   
 0.880
STAM
Signal transducing adapter molecule 1.
    
 0.866
VPS25
Vacuolar protein-sorting-associated protein 25.
    
 0.828
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.