STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZBTB18Zinc finger and BTB domain containing 18. (531 aa)    
Predicted Functional Partners:
CYSTM1
Cysteine-rich and transmembrane domain-containing protein 1.
    
 0.788
TSHZ3
Teashirt zinc finger homeobox 3.
     
 0.620
KCNJ15
Potassium voltage-gated channel subfamily J member 15.
      
 0.580
EPHB6
EPH receptor B6.
    
 0.531
UNC5D
Netrin receptor UNC5D.
      
 0.499
PROK2
Prokineticin domain-containing protein.
      
 0.465
LRRC7
Leucine rich repeat containing 7.
    
 0.449
PTAFR
Platelet activating factor receptor; Belongs to the G-protein coupled receptor 1 family.
  
     0.438
BRINP3
BMP/retinoic acid inducible neural specific 3.
      
 0.433
IER3
Radiation-inducible immediate-early gene IEX-1.
      
 0.429
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.