STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPS18A28S ribosomal protein S18a, mitochondrial isoform 1. (196 aa)    
Predicted Functional Partners:
MRPS18C
28S ribosomal protein S18c, mitochondrial.
   
 0.994
MRPS18B
Mitochondrial ribosomal protein S18B.
   
 0.971
MRPS15
28S ribosomal protein S15, mitochondrial; Belongs to the universal ribosomal protein uS15 family.
   
 0.964
MRPS5
Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
 0.963
MRPS12
Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
   
 0.961
MRPS11
28S ribosomal protein S11, mitochondrial isoform a; Belongs to the universal ribosomal protein uS11 family.
   
 0.956
MRPL21
Mitochondrial ribosomal protein L21.
   
 
 0.954
MRPS30
Mitochondrial ribosomal protein S30.
   
 0.953
MRPS23
28S ribosomal protein S23, mitochondrial.
   
 0.951
ENSCJAP00000071389
Uncharacterized protein.
   
 0.951
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.