SYVN1 protein (Callithrix jacchus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AUP1	DERL1	ENSCJAP00000032012	ENSCJAP00000058143	AUP1 lipid droplet regulating VLDL assembly factor.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.587
AUP1	DERL2	ENSCJAP00000032012	ENSCJAP00000054168	AUP1 lipid droplet regulating VLDL assembly factor.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.673
AUP1	FAM8A1	ENSCJAP00000032012	ENSCJAP00000012332	AUP1 lipid droplet regulating VLDL assembly factor.	Protein FAM8A1.	0.678
AUP1	OS9	ENSCJAP00000032012	ENSCJAP00000012761	AUP1 lipid droplet regulating VLDL assembly factor.	Protein OS-9 isoform 1.	0.752
AUP1	SEL1L	ENSCJAP00000032012	ENSCJAP00000075113	AUP1 lipid droplet regulating VLDL assembly factor.	SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.	0.972
AUP1	SYVN1	ENSCJAP00000032012	ENSCJAP00000054406	AUP1 lipid droplet regulating VLDL assembly factor.	E3 ubiquitin-protein ligase synoviolin isoform b.	0.932
AUP1	UBE2J1	ENSCJAP00000032012	ENSCJAP00000055634	AUP1 lipid droplet regulating VLDL assembly factor.	Ubiquitin-conjugating enzyme E2 J1.	0.891
AUP1	VCP	ENSCJAP00000032012	ENSCJAP00000016575	AUP1 lipid droplet regulating VLDL assembly factor.	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	0.855
DERL1	AUP1	ENSCJAP00000058143	ENSCJAP00000032012	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	AUP1 lipid droplet regulating VLDL assembly factor.	0.587
DERL1	DERL2	ENSCJAP00000058143	ENSCJAP00000054168	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.993
DERL1	ERLEC1	ENSCJAP00000058143	ENSCJAP00000053239	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Endoplasmic reticulum lectin 1 isoform 1.	0.899
DERL1	FAM8A1	ENSCJAP00000058143	ENSCJAP00000012332	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Protein FAM8A1.	0.653
DERL1	OS9	ENSCJAP00000058143	ENSCJAP00000012761	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Protein OS-9 isoform 1.	0.973
DERL1	SEL1L	ENSCJAP00000058143	ENSCJAP00000075113	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.	0.984
DERL1	SYVN1	ENSCJAP00000058143	ENSCJAP00000054406	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	E3 ubiquitin-protein ligase synoviolin isoform b.	0.983
DERL1	UBE2J1	ENSCJAP00000058143	ENSCJAP00000055634	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Ubiquitin-conjugating enzyme E2 J1.	0.774
DERL1	VCP	ENSCJAP00000058143	ENSCJAP00000016575	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	0.988
DERL2	AUP1	ENSCJAP00000054168	ENSCJAP00000032012	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	AUP1 lipid droplet regulating VLDL assembly factor.	0.673
DERL2	DERL1	ENSCJAP00000054168	ENSCJAP00000058143	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.993
DERL2	ERLEC1	ENSCJAP00000054168	ENSCJAP00000053239	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Endoplasmic reticulum lectin 1 isoform 1.	0.816