STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT10Keratin 10; Belongs to the intermediate filament family. (553 aa)    
Predicted Functional Partners:
KRT79
Keratin 79; Belongs to the intermediate filament family.
   
0.895
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.776
TGM5
Transglutaminase 5.
    
 0.721
KRT2
Keratin 2; Belongs to the intermediate filament family.
   
0.706
FLG2
Uncharacterized protein.
   
 0.652
JUP
Junction plakoglobin.
   
 0.642
PKP1
Plakophilin 1.
   
 0.613
IVL
Involucrin; Part of the insoluble cornified cell envelope (CE) of stratified squamous epithelia.
     
 0.578
FERMT1
Fermitin family member 1.
     
 0.573
UMOD
Uromodulin.
   
 0.553
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.