STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZFYVE26Zinc finger FYVE-type containing 26. (2539 aa)    
Predicted Functional Partners:
SPG11
SPG11 vesicle trafficking associated, spatacsin.
   
 
 0.916
TXLNB
Taxilin beta.
      
 0.860
TMEM236
Transmembrane protein 236.
      
 0.824
PRPF6
Pre-mRNA-processing factor 6.
      
 0.786
DDHD2
Phospholipase DDHD2 isoform 1.
    
 
 0.773
SPG21
Maspardin isoform a.
      
 0.770
SPG20
Spartin.
      
 0.770
EIF1AX
Eukaryotic translation initiation factor 1A X-linked.
      
 0.752
IFT80
WD_REPEATS_REGION domain-containing protein.
      
 0.740
PNPLA6
Patatin like phospholipase domain containing 6.
   
  
 0.731
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.