STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCJAP00000054818Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (112 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
   
 0.984
CUL5
Cullin-5; Belongs to the cullin family.
    
 0.940
CUL2
Cullin 2; Belongs to the cullin family.
   
 0.920
TCEB2
Transcription elongation factor B polypeptide 2 isoform a.
   
 0.903
F7IQU3_CALJA
Ubiquitin-like domain-containing protein.
   
 0.903
SOCS2
Suppressor of cytokine signaling 2.
    
 0.870
HIF1A
Hypoxia inducible factor 1 subunit alpha.
    
 0.856
SOCS4
Suppressor of cytokine signaling 4.
    
 0.846
ASB9
Ankyrin repeat and SOCS box protein 9 isoform 1.
    
 0.832
LRR1
Leucine rich repeat protein 1.
    
 0.821
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.