STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM107AFamily with sequence similarity 107 member A. (175 aa)    
Predicted Functional Partners:
PTPRZ1
Protein tyrosine phosphatase receptor type Z1.
      
 0.803
HOPX
HOP homeobox.
      
 0.727
NACC2
Nucleus accumbens-associated protein 2.
      
 0.618
LIFR
LIF receptor subunit alpha.
   
  
 0.592
GPR37L1
G protein-coupled receptor 37 like 1.
   
  
 0.583
PHKG1
Phosphorylase kinase catalytic subunit gamma 1.
      
 0.561
PDGFD
Platelet derived growth factor D; Belongs to the PDGF/VEGF growth factor family.
      
 0.504
CRYAB
SHSP domain-containing protein; May contribute to the transparency and refractive index of the lens. Has chaperone-like activity, preventing aggregation of various proteins under a wide range of stress conditions.
   
  
 0.490
TMEM47
Transmembrane protein 47.
      
 0.471
GNAO1
Guanine nucleotide-binding protein G(O) subunit alpha isoform b.
      
 0.467
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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