STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHX37DEAH-box helicase 37. (1146 aa)    
Predicted Functional Partners:
DDX49
DEAD-box helicase 49; Belongs to the DEAD box helicase family.
   
 0.936
UTP3
UTP3 small subunit processome component.
   
 0.928
WDR46
WD repeat domain 46.
   
 0.919
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.910
NOC4L
Nucleolar complex associated 4 homolog.
   
 0.901
EMG1
Ribosomal RNA small subunit methyltransferase NEP1.
   
 0.898
DCAF13
DDB1 and CUL4 associated factor 13.
   
  0.895
NOP14
NOP14 nucleolar protein.
 
 
 0.893
FCF1
FCF1 rRNA-processing protein.
   
 0.893
UTP20
UTP20 small subunit processome component.
   
 0.892
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (30%) [HD]