STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ONECUT1One cut domain family member. (465 aa)    
Predicted Functional Partners:
ORC3
Origin recognition complex subunit 3.
    
 
 0.663
ATOH7
Atonal bHLH transcription factor 7.
      
 0.563
NEUROG3
Neurogenin 3.
   
 
 0.549
CCNG2
Cyclin-G2; Belongs to the cyclin family.
    
 
 0.547
FECH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
      
 0.526
POU4F1
POU domain protein.
   
 
 0.519
GPR151
G protein-coupled receptor 151.
      
 0.503
VSX2
Visual system homeobox 2.
      
 0.501
FOXA2
Forkhead box A2.
    
 
 0.496
HNF4A
Hepatocyte nuclear factor 4 alpha.
   
 
 0.494
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.