STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM129Transmembrane protein 129. (534 aa)    
Predicted Functional Partners:
RNF144A
RBR-type E3 ubiquitin transferase.
   
  
 0.812
RNFT2
Ring finger protein, transmembrane 2.
      
 0.810
RNF223
RING finger protein 223.
      
 0.810
RNF183
Ring finger protein 183.
      
 0.780
RNF130
E3 ubiquitin-protein ligase RNF130.
      
 0.779
RNFT1
Ring finger protein, transmembrane 1.
      
 0.778
RNF144B
RBR-type E3 ubiquitin transferase.
   
  
 0.729
DERL1
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
    
 0.699
UBE2J2
Ubiquitin-conjugating enzyme E2 J2 isoform 2.
    
 0.644
PEX6
Peroxisomal biogenesis factor 6.
   
  0.628
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.