STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHN1Chimaerin; GTPase-activating protein for p21-rac. (459 aa)    
Predicted Functional Partners:
NCK2
Cytoplasmic protein.
    
 0.568
EPHB3
EPH receptor B3.
    
 0.555
SEMA3F
Semaphorin-3F; Belongs to the semaphorin family.
      
 0.492
PLXNA1
Plexin A1.
      
 0.490
EPHB1
EPH receptor B1.
    
 0.487
UBE4B
U-box domain-containing protein.
      
 0.461
CDC42
Cell division control protein 42 homolog isoform 1.
   
 0.435
ENSCJAP00000069652
Uncharacterized protein.
   
 0.435
ENSCJAP00000073331
Uncharacterized protein.
   
 0.435
BCR
BCR activator of RhoGEF and GTPase.
   
0.425
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.