NXPH3 protein (Callithrix jacchus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

NXPH3

Neurexophilin; May be signaling molecules that resemble neuropeptides. (252 aa)

Predicted Functional Partners:

LOC100399806

0.701

TNNC2

0.532

FGF20

0.508

NRXN1

0.499

DHCR7

0.448

ZIC2

0.448

TAC1

0.448

F7H2X0_CALJA

0.431

TAFA1

0.414

CRYBA4

0.405

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRYBA4	NXPH3	ENSCJAP00000015806	ENSCJAP00000055838	Crystallin beta A4; Belongs to the beta/gamma-crystallin family.	Neurexophilin; May be signaling molecules that resemble neuropeptides.	0.405
CRYBA4	TNNC2	ENSCJAP00000015806	ENSCJAP00000031973	Crystallin beta A4; Belongs to the beta/gamma-crystallin family.	Troponin C2, fast skeletal type.	0.461
DHCR7	NXPH3	ENSCJAP00000021047	ENSCJAP00000055838	7-dehydrocholesterol reductase.	Neurexophilin; May be signaling molecules that resemble neuropeptides.	0.448
F7H2X0_CALJA	NXPH3	ENSCJAP00000024501	ENSCJAP00000055838	GLI family zinc finger 2.	Neurexophilin; May be signaling molecules that resemble neuropeptides.	0.431
FGF20	NXPH3	ENSCJAP00000021821	ENSCJAP00000055838	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Neurexophilin; May be signaling molecules that resemble neuropeptides.	0.508
LOC100399806	NXPH3	ENSCJAP00000025234	ENSCJAP00000055838	Endothelin-converting enzyme-like 1.	Neurexophilin; May be signaling molecules that resemble neuropeptides.	0.701
LOC100399806	TAC1	ENSCJAP00000025234	ENSCJAP00000072938	Endothelin-converting enzyme-like 1.	Tachykinin precursor 1.	0.445
NRXN1	NXPH3	ENSCJAP00000063977	ENSCJAP00000055838	Neurexin 1.	Neurexophilin; May be signaling molecules that resemble neuropeptides.	0.499
NXPH3	CRYBA4	ENSCJAP00000055838	ENSCJAP00000015806	Neurexophilin; May be signaling molecules that resemble neuropeptides.	Crystallin beta A4; Belongs to the beta/gamma-crystallin family.	0.405
NXPH3	DHCR7	ENSCJAP00000055838	ENSCJAP00000021047	Neurexophilin; May be signaling molecules that resemble neuropeptides.	7-dehydrocholesterol reductase.	0.448
NXPH3	F7H2X0_CALJA	ENSCJAP00000055838	ENSCJAP00000024501	Neurexophilin; May be signaling molecules that resemble neuropeptides.	GLI family zinc finger 2.	0.431
NXPH3	FGF20	ENSCJAP00000055838	ENSCJAP00000021821	Neurexophilin; May be signaling molecules that resemble neuropeptides.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.508
NXPH3	LOC100399806	ENSCJAP00000055838	ENSCJAP00000025234	Neurexophilin; May be signaling molecules that resemble neuropeptides.	Endothelin-converting enzyme-like 1.	0.701
NXPH3	NRXN1	ENSCJAP00000055838	ENSCJAP00000063977	Neurexophilin; May be signaling molecules that resemble neuropeptides.	Neurexin 1.	0.499
NXPH3	TAC1	ENSCJAP00000055838	ENSCJAP00000072938	Neurexophilin; May be signaling molecules that resemble neuropeptides.	Tachykinin precursor 1.	0.448
NXPH3	TAFA1	ENSCJAP00000055838	ENSCJAP00000078693	Neurexophilin; May be signaling molecules that resemble neuropeptides.	Uncharacterized protein.	0.414
NXPH3	TNNC2	ENSCJAP00000055838	ENSCJAP00000031973	Neurexophilin; May be signaling molecules that resemble neuropeptides.	Troponin C2, fast skeletal type.	0.532
NXPH3	ZIC2	ENSCJAP00000055838	ENSCJAP00000039071	Neurexophilin; May be signaling molecules that resemble neuropeptides.	Zic family member 2.	0.448
TAC1	LOC100399806	ENSCJAP00000072938	ENSCJAP00000025234	Tachykinin precursor 1.	Endothelin-converting enzyme-like 1.	0.445
TAC1	NXPH3	ENSCJAP00000072938	ENSCJAP00000055838	Tachykinin precursor 1.	Neurexophilin; May be signaling molecules that resemble neuropeptides.	0.448