STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARGLU1Arginine and glutamate-rich protein 1. (273 aa)    
Predicted Functional Partners:
PNISR
Arginine/serine-rich protein PNISR.
   
 
 0.687
MSL3
MSL complex subunit 3.
    
 0.662
NDUFAF8
Uncharacterized protein C17orf89.
      
 0.644
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
   
 
 0.566
MSL2
Male-specific lethal 2 homolog isoform 1.
    
 0.546
SLC9A2
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
      
 0.528
SRPK2
SRSF protein kinase 2 isoform a.
   
 
 0.512
PNN
Pinin.
   
   0.492
SRSF11
Serine and arginine rich splicing factor 11.
   
 
 0.477
SNRNP70
Small nuclear ribonucleoprotein U1 subunit 70.
   
 
 0.464
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.