CASK protein (Callithrix jacchus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APBA1	CASK	ENSCJAP00000002972	ENSCJAP00000055973	Amyloid beta precursor protein binding family A member 1.	Uncharacterized protein; Belongs to the MAGUK family.	0.992
APBA1	CASKIN1	ENSCJAP00000002972	ENSCJAP00000027717	Amyloid beta precursor protein binding family A member 1.	CASK interacting protein 1.	0.594
APBA1	DLG1	ENSCJAP00000002972	ENSCJAP00000025477	Amyloid beta precursor protein binding family A member 1.	Uncharacterized protein; Belongs to the MAGUK family.	0.452
APBA1	LIN7A	ENSCJAP00000002972	ENSCJAP00000035912	Amyloid beta precursor protein binding family A member 1.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.943
APBA1	LIN7B	ENSCJAP00000002972	ENSCJAP00000000312	Amyloid beta precursor protein binding family A member 1.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.931
APBA1	LIN7C	ENSCJAP00000002972	ENSCJAP00000057896	Amyloid beta precursor protein binding family A member 1.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.952
APBA2	CASK	ENSCJAP00000070370	ENSCJAP00000055973	Amyloid beta precursor protein binding family A member 2.	Uncharacterized protein; Belongs to the MAGUK family.	0.907
APBA2	LIN7A	ENSCJAP00000070370	ENSCJAP00000035912	Amyloid beta precursor protein binding family A member 2.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.669
APBA2	LIN7B	ENSCJAP00000070370	ENSCJAP00000000312	Amyloid beta precursor protein binding family A member 2.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.669
APBA2	LIN7C	ENSCJAP00000070370	ENSCJAP00000057896	Amyloid beta precursor protein binding family A member 2.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.669
APBA3	CASK	ENSCJAP00000027605	ENSCJAP00000055973	Amyloid beta A4 protein-binding family A member 3.	Uncharacterized protein; Belongs to the MAGUK family.	0.890
APBA3	LIN7A	ENSCJAP00000027605	ENSCJAP00000035912	Amyloid beta A4 protein-binding family A member 3.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.618
APBA3	LIN7B	ENSCJAP00000027605	ENSCJAP00000000312	Amyloid beta A4 protein-binding family A member 3.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.618
APBA3	LIN7C	ENSCJAP00000027605	ENSCJAP00000057896	Amyloid beta A4 protein-binding family A member 3.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.618
CASK	APBA1	ENSCJAP00000055973	ENSCJAP00000002972	Uncharacterized protein; Belongs to the MAGUK family.	Amyloid beta precursor protein binding family A member 1.	0.992
CASK	APBA2	ENSCJAP00000055973	ENSCJAP00000070370	Uncharacterized protein; Belongs to the MAGUK family.	Amyloid beta precursor protein binding family A member 2.	0.907
CASK	APBA3	ENSCJAP00000055973	ENSCJAP00000027605	Uncharacterized protein; Belongs to the MAGUK family.	Amyloid beta A4 protein-binding family A member 3.	0.890
CASK	CASKIN1	ENSCJAP00000055973	ENSCJAP00000027717	Uncharacterized protein; Belongs to the MAGUK family.	CASK interacting protein 1.	0.931
CASK	DLG1	ENSCJAP00000055973	ENSCJAP00000025477	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein; Belongs to the MAGUK family.	0.959
CASK	ENSCJAP00000073928	ENSCJAP00000055973	ENSCJAP00000073928	Uncharacterized protein; Belongs to the MAGUK family.	PDZ domain-containing protein.	0.907