STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM192Transmembrane protein 192. (315 aa)    
Predicted Functional Partners:
FBXO27
F-box protein 27.
   
 0.708
HELB
DNA helicase B.
    
 
 0.702
SPRYD4
SPRY domain-containing protein 4.
   
  0.658
GOSR1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
   
 0.652
PSMA4
Proteasome subunit alpha type.
    
 0.635
SMPX
Small muscle protein X-linked.
      
 0.619
KLHL34
Kelch like family member 34.
    
 0.612
PCP4L1
Purkinje cell protein 4 like 1.
   
 0.605
STX5
Syntaxin-5 isoform 1; Belongs to the syntaxin family.
    
 0.576
SLC38A9
Putative sodium-coupled neutral amino acid transporter 9 isoform 1.
    
 
 0.575
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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