STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCJAP00000056102Uncharacterized protein. (213 aa)    
Predicted Functional Partners:
POFUT2
Uncharacterized protein.
 
     0.949
SPON1
Spondin 1.
     
 0.647
SPON2
Spondin-2.
     
 0.506
THBS1
Thrombospondin 1.
     
 0.496
POFUT1
GDP-fucose protein O-fucosyltransferase 1 isoform 1.
      
 0.495
B3GALTL
Beta-1,3-glucosyltransferase.
      
 0.473
RWDD2B
RWD domain-containing protein.
      
 0.446
ADAMTS8
ADAM metallopeptidase with thrombospondin type 1 motif 8.
     
 0.440
ADAMTS20
ADAM metallopeptidase with thrombospondin type 1 motif 20.
     
 0.439
ADAMTS5
ADAM metallopeptidase with thrombospondin type 1 motif 5.
     
 0.430
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.