STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCJAP00000056213Uncharacterized protein. (92 aa)    
Predicted Functional Partners:
POT1
Protection of telomeres 1.
    
 0.857
TEP1
Telomerase associated protein 1.
   
 
 0.848
DKC1
Dyskerin pseudouridine synthase 1.
    
 0.802
ACD
ACD shelterin complex subunit and telomerase recruitment factor.
    
 0.775
XRCC5
X-ray repair cross complementing 5.
   
 
 0.760
WRAP53
WD repeat containing antisense to TP53.
    
 0.755
TRUB1
TruB pseudouridine synthase family member 1.
    
 0.703
SMG6
Telomerase-binding protein EST1A isoform 1.
   
 
 0.654
CTNNB1
Catenin beta 1.
    
 0.643
RPA1
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
    
 
 0.628
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.