STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL5339S ribosomal protein L53, mitochondrial. (112 aa)    
Predicted Functional Partners:
MRPL50
39S ribosomal protein L50, mitochondrial.
   
 
 0.936
MRPS31
28S ribosomal protein S31, mitochondrial.
   
 
 0.894
MRPL51
Uncharacterized protein.
    
 
 0.892
MRPL4
Mitochondrial ribosomal protein L4.
   
 
 0.872
MRPL10
Mitochondrial ribosomal protein L10.
   
 
 0.869
MRPL40
39S ribosomal protein L40, mitochondrial.
   
 
 0.865
GADD45GIP1
GADD45G interacting protein 1.
    
 
 0.851
MRPS30
Mitochondrial ribosomal protein S30.
    
   0.849
MRPL32
Mitochondrial ribosomal protein L32.
   
   0.836
MRPS18B
Mitochondrial ribosomal protein S18B.
    
 
 0.828
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.