STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRCH1Leucine rich repeats and calponin homology domain containing 1. (766 aa)    
Predicted Functional Partners:
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.820
LRP10
LDL receptor related protein 10.
    
 0.819
PPARGC1A
PPARG coactivator 1 alpha.
    
 
 0.779
LPHN1
Adhesion G protein-coupled receptor L1; Belongs to the G-protein coupled receptor 2 family.
   
   0.718
ADGRL2
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
   
   0.718
ADGRL3
Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.
   
   0.718
DOCK8
Dedicator of cytokinesis 8; Belongs to the DOCK family.
   
 
 0.647
ENSCJAP00000067781
Tnp_22_trimer domain-containing protein.
   
 
 0.647
CTIF
Cap binding complex dependent translation initiation factor.
      
 0.645
ERBB2
Receptor protein-tyrosine kinase.
    
 0.624
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.