STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCJAP00000056911SH3 domain-containing protein. (669 aa)    
Predicted Functional Partners:
NPHP4
Nephrocystin 4.
   
 0.970
RPGRIP1L
RPGRIP1 like.
    
 0.913
MALL
Mal, T cell differentiation protein like.
 
    
 0.748
F7HPU0_CALJA
Uncharacterized protein.
   
 
 0.735
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.711
CEP290
Centrosomal protein 290.
   
 0.695
NPHP3
TPR_REGION domain-containing protein.
    
 0.691
TMEM67
Transmembrane protein 67.
   
  
 0.691
ITSN2
Intersectin 2.
     
 0.687
ENSCJAP00000078263
Uncharacterized protein.
     
 0.687
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.