STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H1-2Histone cluster 1 H1 family member c. (213 aa)    
Predicted Functional Partners:
KLK8
Kallikrein related peptidase 8; Belongs to the peptidase S1 family.
    
 0.694
CDK2
Cyclin dependent kinase 2; Belongs to the protein kinase superfamily.
   
 0.646
CRTAP
Cartilage-associated protein.
      
 0.613
FSTL3
Follistatin like 3.
      
 0.562
PPP3CA
Serine/threonine-protein phosphatase.
    
 
 0.514
CDK3
Cyclin dependent kinase 3; Belongs to the protein kinase superfamily.
   
 0.513
NGEF
Neuronal guanine nucleotide exchange factor.
    
 
 0.506
CBX3
Chromobox protein homolog 3.
    
 0.481
ENSCJAP00000067326
Uncharacterized protein.
    
 0.481
MDK
Midkine isoform a.
    
 
 0.468
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.