STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H1-3Histone cluster 1 H1 family member d. (221 aa)    
Predicted Functional Partners:
CDK2
Cyclin dependent kinase 2; Belongs to the protein kinase superfamily.
   
 0.646
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
    
 0.589
TRIM10
Tripartite motif containing 10.
    
 
 0.569
MPPED2
Metallophosphoesterase domain containing 2.
      
 0.569
S100A16
EF-hand domain-containing protein; Belongs to the S-100 family.
      
 0.563
S100A13
S100 calcium binding protein A13; Belongs to the S-100 family.
      
 0.562
LONRF3
LON peptidase N-terminal domain and ring finger 3.
    
 0.536
S100A3
S100 calcium binding protein A3.
      
 0.534
F7ICG1_CALJA
H15 domain-containing protein.
   
 0.534
ENSCJAP00000065716
Histone H2B; Belongs to the histone H2B family.
 
 
 0.520
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.